After upgrading to 4.7.2 from 4.6.11 I no longer can load any of my custom_php reports or searches. The custom folder location is not inserted into the include path
Fatal error: require_once(): Failed opening required 'CRM/Report/Form/Member/NWTAByUnit.php' (include_path='.:/home/mysite/public_html/test/sites/all/modules/civicrm:/home/mysite/public_html/test/sites/all/modules/civicrm/packages:.:/home/mysite/public_html/test/sites/all/modules/civicrm:/home/mysite/public_html/test/sites/all/modules/civicrm/packages:/home/mysite/public_html/test/sites/all/modules/civicrm/vendor/phpseclib/phpseclib/phpseclib:.:/usr/lib/php:/usr/local/lib/php:/usr/local/php56/lib/php') in /home/mysite/public_html/test/sites/all/modules/civicrm/CRM/Core/Controller.php on line 451
The location is set at /home/mysite/public_html/test/sites/all/modules/files/civicrm/custom_php
Running Drupal 7.41 and PHP 5.6. Everything else in the upgrade seemed to work fine. All custom data is available and the extensions directory is working correctly.
I've tried to set the path both via the settings files and the web interface. The web interface does accept the path as valid and sets it correctly.