On my install CiviCRM runs in a separate database that is entirely InnoDB, but Civi throws up the MyISAM engine error anyway. The rest of wordpress lives in a DB that is InnoDB by default, although the tables are a mix of the two types, but I don't see why that matters. So why am I getting the MyISAM Engine error in Civi?
Versions: CiviCRM 4.7.11, wordpress 4.6.1, PHP 5.6.24, MySQL 5.0.11